3.2/2008-09

About PRIMOS - The Protein Interaction and Molecule Search

The PRIMOS engine is developed in the scope of the research project InSilico Proteomic System (ISP), part of the infrastructure initiative BIOMIS funded by the FHplus research program. To contact the team please mail to primos@fh-hagenberg.at.

Project partners

University of Applied Sciences
Research Center Hagenberg
Hagenberg, Austria
http://research.fh-hagenberg.at
 
Paracelsus Medical Private University
Department of Dermatology
Salzburg, Austria
http://www.dermatologie-lks.at/

DI(FH) Thomas Kern (project management)
DI(FH) Viktoria Dorfer
DI(FH) Christian Frech
DI(FH) Michael Kommenda

former team members:
DI(FH) Wolfgang Strasser
DI(FH) Doris Siegl
DI(FH) Elisabeth Adler
DI(FH) Franz Pfeifer

Univ.-Ass. Mag. Dr. Kamil Oender
Univ.-Doz. Dr. Johann Bauer
Univ.-Prof. Dr. Helmut Hintner

Publications & Talks
  • Michael Kommenda et.al.: Integration und Bereinigung von Protein-Protein-Interaktionsdaten at the 2. Forschungsforum der österreichischen Fachhochschulen in Wels, Austria, March 2008 (details).
  • Wolfgang Straßer et.al.: Integration and Reassessment of Public Protein-Protein Interaction Data. Poster presentation by Michael Kommenda at ISCB/ECCB 2007 in Vienna, Austria (details).
  • Wolfgang Straßer: Talk at the International Workshop of Integrative Bioinformatics, Harpenden, UK. September, 4th 2006. (workshop details)
  • Wolfgang Straßer et.al.: InSilico Proteomics System: Integration and Application of Protein and Protein-Protein Interaction Data using Microsoft .NET. Journal of Integrative Bioinformatics 3(2):27. (article details)
  • Wolfgang Straßer et.al.: InSilico Proteomics System: Combining Public and Private Protein Data for Computational Validation of Experimental Results. Poster presentation at 4th European Conference on Computational Biology (ECCB) 2005 in Madrid, Spain. ( poster details)
  • Wolfgang Straßer et.al.: InSilico Proteomics System: An Integrated Database for Protein-Protein Interaction and Experimental Data. Proceedings of FH Science Day 2005, Steyr, Austria. ( details)

Technical background
The PRIMOS system uses Microsoft .NET technology as its primary development platform. The database back-end is realized using a SQL-Server 2005 instance. The Primos Interaction Viewer uses Java technology, because of the required interactive user-interface.